In the year 2012 Japan was invaded by the Mu. Human-like beings from another dimension with blue blood. 
In the year 2015 Tokyo is attacked by invaders, who are repelled by a humanoid weapon called a Dolem. During the chaos, Ayato Kamina meets Reika Mishima, a classmate. 
During that same day, he is attacked by government officials but a woman named Haruka comes to his rescue, informing him that she was sent to get him by the Organization TERRA, and that Tokyo had been sealed in a time rift where time flows one third as fast as the outside world. 
He flees from Haruka onto a train where he sees Reika once more. Arriving at the Room of Rah, he follows her to a tremendous egg where the Dolem RahXephon is hatched from, and upon her singing his mother appears atop the Dolem that had stopped the TERRA Invasion. In the battle Ayato's mother is injured, and Ayato flees Tokyo Jupiter with Haruka upon seeing his mother's blue blood.

Quon Kisaragi was surprised when she saw an illusion of herself floating in midair. This other "self" of her claimed that she is a fragment of Quon. Thus an existentialistic dialogue began between the two.
 
(Source: Anime News Network)
 
OVA side story bundled with the RahXephon Special Edition game for the Sony PlayStation 2.

Ayato Kamina was separated from the girl he loved, Haruka Mishima, when an event occurred that was thought to have killed everyone outside of Tokyo. But one day three years later, invaders suddenly attacked the city. It was then that he meets an agent of TERRA, Haruka Shitow, who tells him that she will give him the truth about the world. It is the beginning of a series of strange events, which involve him activating a giant mecha, the RahXephon and finding out that many people, including his own mother, has blue blood, and that he was actually living in a self-encased dimension where time moves slower than that of the outside world.
 
(Source: Anime News Network)

DVD Specials for the Series RahXephon: 
1. Memories (Episode 9.5) 
2. Ichiko Hashimoto - The Fate of Katun

A mysterious orb envelops the city of Tokyo. All forms of communication are severed, leaving the inhabitants of the newly dubbed "Tokyo Jupiter" ignorant to their fate. Along with the United Nations, a special organization known as TERRA is formed: their mission is to liberate Tokyo from the otherwordly MU -- those responsible for Tokyo's capture. (Source: VIZ Media)

More action and giant robots await in the Rahxephon novel. Relive events from the anime plus untold stories from a 1st person perspective, seen through the eyes of the various characters in the Raxephon mythos. 
(Source: DrMaster Publications)

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